pymol绘制分子间相互作用

example

PLIP

pymol

set surface_carve_cutoff, 4.5
set surface_carve_selection, mol
set surface_carve_normal_cutoff, -0.1
show surface, pro within 8 of mol
set two_sided_lighting
set transparency, 0.5
show sticks, mol
set surface_color, violet
set surface_type, 2