interaction analysis
Non-covalent interactions between proteins and ligands
pymol
pi-pi
- set ray_shadows,0
- create 8bcovbond, sele
- select a1, sele
- select a2, sele
- bond a1,a2
- pseudoatom 9lcenter1, sele
- pseudoatom 9lcenter2, sele
- distance 9l-pi_pi_distance, 9lcenter1, 9lcenter2